Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq555 147 2e-33 >seq555 Length=3447 Score = 147 bits (162), Expect = 2e-33 Identities = 152/198 (77%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| ||||| |||||| || Sbjct 2483 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCGGGGCAATCAAAC 2542 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||||| | ||||| | | |||| || | || |||| ||| || ||||| || Sbjct 2543 CGCGTTAGTTCAACTTAGCATATATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 2602 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| |||||||||||||||| || || | | || |||||| Sbjct 2603 TCTCGGACATGGACCTTAGCACCCATGCCCTCACT-GCCGTAAATCATTTATTAGCATTC 2661 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| ||||| ||| Sbjct 2662 GGAGTTTGTCAGGAATTG 2679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537590573520