Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01000150.1
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
seq1201 147 2e-33
seq583 138 8e-31
seq412 120 2e-25
seq400 80.6 2e-13
>seq1201
Length=1307
Score = 147 bits (162), Expect = 2e-33
Identities = 105/121 (87%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77
||||| ||||||||| ||||||||||||||||||||||| | ||||||| ||||||||
Sbjct 902 TACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCCTACCGTGGTAATCGCCCTCC 961
Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137
| ||||| |||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct 962 TTACGGTTAGGCTAACTACTTCTGGTAAAACCCACTCCCATGGTGTGACGGGCGGTGTGT 1021
Query 138 A 138
|
Sbjct 1022 A 1022
>seq583
Length=3271
Score = 138 bits (152), Expect = 8e-31
Identities = 103/121 (85%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77
||||| ||||||||| ||||||||||||||||| ||| | | ||||||||||||||||
Sbjct 2348 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCCGCCGTGGTAAGCGCCCTCC 2407
Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137
| ||||| ||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 2408 TTACGGTTAGGCTACCTACTTCTGGCGAGACCCGCTCCCATGGTGTGACGGGCGGTGTGT 2467
Query 138 A 138
|
Sbjct 2468 A 2468
>seq412
Length=5103
Score = 120 bits (132), Expect = 2e-25
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77
||||| ||||||||| ||||||||||||||||| ||| | ||||||| ||||||||
Sbjct 4306 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCTGCCGTGGTAATCGCCCTCC 4365
Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137
||||| |||| |||||||| ||||| ||||||||||||||||||||||||||
Sbjct 4366 TTGCGGTTAGGCTAACTACTTCTGGCAGAACCCGCTCCCATGGTGTGACGGGCGGTGTGT 4425
Query 138 A 138
|
Sbjct 4426 A 4426
>seq400
Length=5312
Score = 80.6 bits (88), Expect = 2e-13
Identities = 94/126 (75%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||| | | | ||||| || ||
Sbjct 776 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGCTGACCCTACCGTGGTCGGCTGCC 835
Query 75 TCCC--GAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGG 132
||| | ||||| ||| |||| | |||| ||||||||||||||||||||||
Sbjct 836 TCCATTGCTGGTTAGCGCACCGCCTTCGGGTAGAACCAACTCCCATGGTGTGACGGGCGG 895
Query 133 TGTGTA 138
||||||
Sbjct 896 TGTGTA 901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345594135600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |