Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq194 125 1e-26 >seq194 Length=13415 Score = 125 bits (138), Expect = 1e-26 Identities = 164/219 (75%), Gaps = 11/219 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || ||| | |||||| ||| ||||| |||| ||| Sbjct 11365 GTACAAAGGGCAGGGACGTAATCAATGCAAGC-TAATGACTTGCGTTTACTTGGAA-TTC 11422 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG--ATGAAATTTCAAAGAT 118 |||||| | || || ||||||||| || |||| | ||| ||| ||| || | | Sbjct 11423 CTCGTTCATGAAAAATAATTGCAATTTTCACTCCCAGTTACGTAATG--CTTTAAAGGTT 11480 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| || | || | ||| | || | || || || |||||||||||||| Sbjct 11481 TACCC--ACTTATC-TCTAAG--CAGGAACATGATGCTCACTACATTGTAGCGCGCGTGC 11535 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | |||||||||||||||||||||||||||| || Sbjct 11536 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATCGC 11574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751986814150