Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq194 125 1e-26
>seq194
Length=13415
Score = 125 bits (138), Expect = 1e-26
Identities = 164/219 (75%), Gaps = 11/219 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| || ||| | |||||| ||| ||||| |||| |||
Sbjct 11365 GTACAAAGGGCAGGGACGTAATCAATGCAAGC-TAATGACTTGCGTTTACTTGGAA-TTC 11422
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG--ATGAAATTTCAAAGAT 118
|||||| | || || ||||||||| || |||| | ||| ||| ||| || | |
Sbjct 11423 CTCGTTCATGAAAAATAATTGCAATTTTCACTCCCAGTTACGTAATG--CTTTAAAGGTT 11480
Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||||| || | || | ||| | || | || || || ||||||||||||||
Sbjct 11481 TACCC--ACTTATC-TCTAAG--CAGGAACATGATGCTCACTACATTGTAGCGCGCGTGC 11535
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | |||||||||||||||||||||||||||| ||
Sbjct 11536 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATCGC 11574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751986814150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |