Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq194 113 2e-22
>seq194
Length=13415
Score = 113 bits (124), Expect = 2e-22
Identities = 95/117 (81%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
|| |||||||||||||||||||||||| | ||||| ||| |||| |||| |||| ||
Sbjct 9907 TGCGACCCGAAAGATGGTGAACTATGCTAGCGCAGGGTAAAGTCAGAAGAAATTCTGATG 9848
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| ||||| |||||| ||| ||||||||||| ||||| | | ||||||||||||
Sbjct 9847 GAAGCTCGAAGCGGTCCTGACGTGCAAATCGGTCGTCTGACGTTAGTATAGGGGCGA 9791
Score = 96.9 bits (106), Expect = 1e-17
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||| | |||||| | || | || | |||| || ||||| |||||||
Sbjct 10508 GAGTCGTGTTGCTTGGAAGTGCAGCGCAAAGTTGGTGATAAACATCATCTAAGGCTAAAT 10449
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| || ||||||||| ||||||| |||| |||| || |||| ||| |||
Sbjct 10448 ATCCCTATGAATCCGATAGCGAACAAGTACTGTGAAGGAAAATTGCAAAGTACTCCGGAG 10389
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
||||||||||| || ||||||||
Sbjct 10388 AGAGAGTTAAAGAGGACGTGAAA 10366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079961175500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |