Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq555 147 2e-33
>seq555
Length=3447
Score = 147 bits (162), Expect = 2e-33
Identities = 139/175 (79%), Gaps = 3/175 (2%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| |||||| || |||| | || || |||||| ||| |||||||||| || ||
Sbjct 2039 CGCAAACCGACACAGGTGGTCGAGGAGAGAATCCTAAGGTGCTCGAGTGAATCATGGCTA 1980
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||||| | |||||||||||||||| || ||| || | ||| ||| |
Sbjct 1979 AGGAACTCGGCAAAATAGCCCTGTAACTTCGGGAGAAGGGGCGCC--CACAGCGATGTG- 1923
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| ||| ||| |||||| |||||||| ||||||||||||||| ||| ||
Sbjct 1922 GGCCGCAGTGAAAAGGCCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCAAA 1868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531190685740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |