Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq412 179 4e-43
seq1688 152 5e-35
seq555 100 3e-19
>seq412
Length=5103
Score = 179 bits (198), Expect = 4e-43
Identities = 107/112 (96%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1436 GGTCGCAGTAACCAGGCCGCTGCGACTGTTTATCAAAAACACAGCACTCTGCAAACACGA 1377
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158
||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1376 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCTGGAAGGTTAATTGATG 1325
>seq1688
Length=639
Score = 152 bits (168), Expect = 5e-35
Identities = 90/94 (96%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 503 GCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 444
Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158
||||||||||||||||| ||||| |||| |||||
Sbjct 443 TGACGCCTGCCCGGTGCTGGAAGATTAAATGATG 410
>seq555
Length=3447
Score = 100 bits (110), Expect = 3e-19
Identities = 78/93 (84%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119
||||| |||||||||||| |||||||||| ||||||||| |||||| || |||||
Sbjct 1909 AGGCCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCAAAATCGAAAGATGAAGTATA 1850
Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| |||| |||||||||||| ||||||||||
Sbjct 1849 GGGCCTGACACCTGCCCGGTGCTGGAAGGTTAA 1817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476791639610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |