Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01001182.1
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
seq134 100 4e-19
seq104 95.1 2e-17
seq96 87.8 3e-15
>seq134
Length=22675
Score = 100 bits (110), Expect = 4e-19
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113
|||| | || | || || |||||||| ||||||||||| || |||||||||||||| ||
Sbjct 19859 CAGGGCGGGCGAGGGGGCCTCTTCCAGCACCTTCTGGTGGCGGCGTTGCAGCGAGCAGTC 19800
Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGG 151
||| ||||||||||||| | ||| ||| |||| |||||
Sbjct 19799 GCGTTCGCCCAGGTGGACGACGTTGCCGTGGCTGTCGG 19762
>seq104
Length=31416
Score = 95.1 bits (104), Expect = 2e-17
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 52 TCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAA 111
|||| |||||| ||||| |||||||| | ||||||||||| || || |||||||||||
Sbjct 29483 TCCATGCCCGGCGCCGGTGCTTCTTCGATCACCTTCTGGTGGCGGCGCTGCAGCGAGCAG 29424
Query 112 TCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACG 171
||||| || |||||||| | | | ||| |||| |||| | || ||||| || | |
Sbjct 29423 TCGCGCTCATGCAGGTGGACGACATTGCCGTGGCTGTCGCCGAAGACCTGCACCTCGATG 29364
Query 172 TGACGTGGGTTGGTCAGGTA 191
|| || ||| ||| | |||
Sbjct 29363 TGGCGCGGGCGGGTGATGTA 29344
>seq96
Length=39921
Score = 87.8 bits (96), Expect = 3e-15
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 52 TCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAA 111
|||| ||| || ||||| ||||| || | ||||||||||| || || |||||||||||
Sbjct 21590 TCCATGCCGGGCGCCGGGGCTTCCTCGATCACCTTCTGGTGGCGGCGCTGCAGCGAGCAG 21531
Query 112 TCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACG 171
||||| || |||||||| | ||| ||| |||| |||| | || ||||| || | |
Sbjct 21530 TCGCGTTCATGCAGGTGGACGACGTTGCCGTGGCTGTCGCCGAAGACCTGCACCTCGATG 21471
Query 172 TGACGTGG 179
|| || ||
Sbjct 21470 TGGCGCGG 21463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 735987094700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |