Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01001383.1
Length=561
Score E
Sequences producing significant alignments: (Bits) Value
seq564 114 4e-23
>seq564
Length=3373
Score = 114 bits (126), Expect = 4e-23
Identities = 234/338 (69%), Gaps = 10/338 (3%)
Strand=Plus/Plus
Query 91 GACGAAGTTCTGCTCCGTGAGGACGGCCATCTGACTTAGATAATTTAAGGACGCCTCACC 150
||||||||||||| |||| ||| |||||||||| | | | || | || ||
Sbjct 1836 GACGAAGTTCTGCACCGTAAGGCCGGCCATCTGGGTGAAGGTCGACATGGTGGTTTCGCC 1895
Query 151 GCTGTTGTTCTGCCAGTTGGTATTGGTCATGAAACTGACGGCGGTATTAAACGCCTAGGT 210
|| | ||||||||||||||| ||||||| ||| ||||||||||| || || ||| ||||
Sbjct 1896 GCCATAGTTCTGCCAGTTGGTGTTGGTCACGAAGCTGACGGCGGTGTTGAAGGCC-AGGT 1954
Query 211 CCATTCCTGGCCCGGC-AGGTTTTGCGGGTTCAGCGGGAGGGAGCCTTGAAATAACAGAA 269
| | | ||| | | |||||||||| ||| |||| ||| || | ||| |
Sbjct 1955 GCGGGCTGAGACCGTCAAACCCCTGCGGGTTCATCGGCAGGGCGCCCTGCAGCCGCAGCA 2014
Query 270 TAGAGAACAGCAGCAGGAAGCCGGCGAGGTTGAATGCGAGCA-AG-GCCAGCATGTACTT 327
| | |||||||||||||| || |||||||| || |||| || ||| || ||
Sbjct 2015 GGCCGTAGAGCAGCAGGAAGCCCGCCAGGTTGAAGGCCAGCAGAGCGCCGACA--TAGCC 2072
Query 328 CTGCCAGCTTTGTTCCTGC-TGTGCGTCCACACCCGACAG-GCGATAACAGGCGCTTTCC 385
| |||||| || |||| ||| | || |||| | | |||||| || || ||
Sbjct 2073 CAGCCAGCCCTG--GCTGCGCGTGGGGTCAACCCCGGCGGCGCGATAGAAGAGGCCCTCA 2130
Query 386 ACCGGCCCCAGCACCGGGCTGAGCCAGGTGCGCTGGCC 423
|||||| |||||||||| |||||||| |||| |||
Sbjct 2131 ACCGGCTTCAGCACCGGGTCCAGCCAGGTCCGCTCGCC 2168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1692769360320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |