Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq99 141 3e-31 >seq99 Length=37895 Score = 141 bits (156), Expect = 3e-31 Identities = 195/273 (71%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCAC 187 |||||||||| |||||||| || | ||||| ||| ||| |||||||||||| || Sbjct 8626 GTGAACCTTGCGGATGAAGTGCTTGATCATCTCTTCGGCGACTTCGAAGTCGGCGATGAC 8685 Query 188 GCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTT 247 |||||| |||||| || ||||| | || | ||| || || ||||| ||||| |||| Sbjct 8686 GCCGTCGCGCATCGGGCGGATGGCTTCCATGTGGCCGGGCGTCCGGCCCAGCATCTGCTT 8745 Query 248 GGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAAC 307 |||||| |||||| || ||| | || | || | | || | ||| || || Sbjct 8746 GGCCTCAAGGCCGACAGCGTGGACGATCTTGCGGCCGCCGACGTTGCGCAGGGCGACGAC 8805 Query 308 CGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCC 367 ||| ||||| ||||||||||| || |||||| ||| || ||||||||||| || || Sbjct 8806 CGACGGCTCGTTCAGGACGATCCCCTTGCCGCGCATGTAGATCAGGGTGTTGGCCGTCCC 8865 Query 368 CAGGTCAATGGAAAGATCGCTGGAAAACATGCC 400 ||| || || | | || |||||| |||||| Sbjct 8866 CAGATCCATCGCGATGTCATTGGAAATCATGCC 8898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353575499840