Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq215 131 3e-28 seq90 113 7e-23 >seq215 Length=11604 Score = 131 bits (144), Expect = 3e-28 Identities = 194/274 (71%), Gaps = 1/274 (0%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 |||||||||||| ||||| | || || ||| | |||| ||| |||||||| | || | Sbjct 649 GCGGCCGCTGGACTTCGCCATCTTTCCCACGG-TGCTGCTGGTCTCGACCCTGTTCCGGC 591 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 ||| ||||| | ||||| |||||| || | | | |||||||||| ||||| | | Sbjct 590 TGGGGCTGAACCTGGCCTCGACGCGGCTGATCCTCAGCAACGGCCAGGAAGGCCACGACA 531 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 ||||| || | |||||||||||||| ||| || |||| || || |||| | | ||| Sbjct 530 GCGCCGGCCAGATCATCCAGGCCTTCGGCGAGCTGATGATGGGTGGCAACTTCATCATCG 471 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 | | | | ||||| |||||| || | | ||||| ||||| | |||||||| || Sbjct 470 GGGTGATCATCTTCGCCATCCTGCTGGTGGTGAACTTCGTGGTCATCACCAAGGGTGCGA 411 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 || || |||||||| || || || ||||| Sbjct 410 CCCGTATCGCCGAGGTGTCGGCCCGCTTCACCCT 377 >seq90 Length=45502 Score = 113 bits (124), Expect = 7e-23 Identities = 190/274 (69%), Gaps = 1/274 (0%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 |||||||||||| ||||| | |||||||| | |||| ||| ||||||| || | Sbjct 24426 GCGGCCGCTGGACTTCGCCATCTTCCCGACCG-TGCTGCTGGTCTCGACCCTTTACCGCC 24368 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 ||| ||||| | ||||| |||||| || | | | |||||||||| || || | | Sbjct 24367 TGGGGCTGAACCTGGCCTCGACGCGGCTGATCCTCAGCAACGGCCAGGAAGGTCACGACA 24308 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 || || ||| | |||||||||||||| || || |||| || || |||| | | ||| Sbjct 24307 GCGCAGGCAAGATCATCCAGGCCTTCGGCGAACTGATGATGGGGGGCAACTTCATCATCG 24248 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 | | | | ||||| |||||| || | | ||||| || || | ||||||||||| Sbjct 24247 GGGTGATCATCTTCGCCATCCTGCTGGTGGTGAACTTCGTCGTCATCACCAAGGGCGCGA 24188 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 || || ||||||| || || || ||||| Sbjct 24187 CCCGTATCGCCGAGGTCTCGGCCCGCTTCACCCT 24154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809585804170