Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq168 116 6e-24 >seq168 Length=16303 Score = 116 bits (128), Expect = 6e-24 Identities = 142/190 (75%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 101 GAAGGCTTCTTAGTGGAATTTCCACGTTGCCCA-CTCGCTTCATGCGTTTTTTACCGGCC 159 ||||||||| | | || || || || ||||| | || || ||| || || || || || Sbjct 12850 GAAGGCTTCCT-GCGGGATCTCGACCTTGCCGAACTGGCG-CATCCGCTTCTTGCCCTCC 12907 Query 160 TTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGT 219 || |||||||| |||||||||||||| ||| | ||||| || |||||||| |||||| | Sbjct 12908 TTCTGCTTCTCCAGCAGCTTGCGCTTGCGGGTGACGTCGCCACCGTAGCACTTGGCCGGC 12967 Query 220 ACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCC 279 |||| ||| | || || ||||| || || ||||||| ||||| ||||| ||| Sbjct 12968 ACGTCCTTGCGCAGGGCGCGGACGGTCTCGCGGGCGATGATCTTGCCGCCGATGGCCGCC 13027 Query 280 TGGATCGCGA 289 ||||||| || Sbjct 13028 TGGATCGGGA 13037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838384824960