Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014
-09-26] 1,810 sequences; 42,486,966 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq194 136 7e-30
>seq194
Length=13415
Score = 136 bits (150), Expect = 7e-30
Identities = 163/216 (75%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACA 172
|| |||||||||||||||||||||||||||| | |||| |||||||||||||| || |
Sbjct 11574 GCGATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACAATGTAGT 11515
Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232
|||| | | |||| | ||| | ||| ||||||| | | ||||| | |||
Sbjct 11514 GAGC-ATCATGTTCCTG--CTTAGAGATAAG---TGGGTAAACCT-TTAAAGCATTACGT 11462
Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
|||| || |||||||||||| || | |||||||||| || ||||| ||| ||
Sbjct 11461 AACTGGGAGTGAAAATTGCAATTATTTTTCATGAACGAGGAATTCCAAGTAAACGCAAGT 11402
Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| ||| || ||||||||||||||||||||||||
Sbjct 11401 CATTAGCTTGCATTGATTACGTCCCTGCCCTTTGTA 11366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947182855680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |