Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq194 136 7e-30 >seq194 Length=13415 Score = 136 bits (150), Expect = 7e-30 Identities = 163/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACA 172 || |||||||||||||||||||||||||||| | |||| |||||||||||||| || | Sbjct 11574 GCGATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACAATGTAGT 11515 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 |||| | | |||| | ||| | ||| ||||||| | | ||||| | ||| Sbjct 11514 GAGC-ATCATGTTCCTG--CTTAGAGATAAG---TGGGTAAACCT-TTAAAGCATTACGT 11462 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292 |||| || |||||||||||| || | |||||||||| || ||||| ||| || Sbjct 11461 AACTGGGAGTGAAAATTGCAATTATTTTTCATGAACGAGGAATTCCAAGTAAACGCAAGT 11402 Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||| || |||||||||||||||||||||||| Sbjct 11401 CATTAGCTTGCATTGATTACGTCCCTGCCCTTTGTA 11366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947182855680