Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_010356.1 Length=190032 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 >seq11 Length=1024817 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 114794 AATTATGAAGGCGCACGTGTTATCGAACCGAAGAAG-GGTTTTTATAATACAGCTATAGC 114852 || ||||| || || |||||| ||||| || ||| |||||||||||| | | || || Sbjct 441785 AAATATGAGGGAGCTACTGTTATTGAACC-AATAAGAGGTTTTTATAATGAACCAATTGC 441843 Query 114853 AACTCTTGATTTTGCATCCCTCTACCCATCAATTATGATTGGGTATAATATGTGTTATAC 114912 || ||||||||||| || || || |||||||||||||||| ||||| | |||||||| Sbjct 441844 TACACTTGATTTTGCTTCACTATATCCATCAATTATGATTGCACATAATCTTTGTTATAC 441903 Query 114913 TACTTTGAT 114921 | | || || Sbjct 441904 TTCATTAAT 441912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607960644579200