Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parastrongyloides_20trichosuri_20[genbank_20GCA_5F000941615.1_202014 -09-26] 1,810 sequences; 42,486,966 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq475 87.8 2e-12 seq567 84.2 2e-11 >seq475 Length=4263 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 156512 TCAGTAGCTCAGCGGATAGAGCAACTGCCTTCTAAGCAGTTGGTCGCAGGTTCAAATCCT 156571 || ||||||||| |||||||||||| ||||||||| | ||||||||||||||| |||||| Sbjct 2247 TCCGTAGCTCAGTGGATAGAGCAACGGCCTTCTAATCCGTTGGTCGCAGGTTCGAATCCT 2188 Query 156572 GCC 156574 ||| Sbjct 2187 GCC 2185 >seq567 Length=3368 Score = 84.2 bits (92), Expect = 2e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 156513 CAGTAGCTCAGC-GGATAGAGCAACTGCCTTCTAAGCAGTTGGTCGCAGGTTCAAATCCT 156571 || ||||||||| ||||||||||||||||||||||||||| |||| ||||||| |||||| Sbjct 1361 CAATAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 1302 Query 156572 G 156572 | Sbjct 1301 G 1301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551363525118000