Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq260 87.8 5e-15 >seq260 Length=172195 Score = 87.8 bits (96), Expect = 5e-15 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 9 AAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGT 68 |||||| |||||||||||| | ||| |||||||||||||||||||| | ||||||||||| Sbjct 84874 AAGAATCAGCACCGGCTAATTCCGTTCCAGCAGCCGCGGTAATACGGAAGGTGCAAGCGT 84815 Query 69 TAATCG 74 || ||| Sbjct 84814 TATTCG 84809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289543102848