Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20exspectatus_20[WormBase_20PRJEB6009-WS248_202015-08- 25] 4,412 sequences; 177,635,997 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq60 91.5 1e-13 >seq60 Length=331869 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 ||||||||| ||||| |||| ||| ||||| ||||| || || | || || | || | Sbjct 157779 CACAAACTTAGGAAGTGCAATAGACGCGAGATTGCACACGGCAACTTCATCGGCAGATGA 157838 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||| || || || || ||||||| ||| || || || |||| |||||||||||| Sbjct 157839 ATATTCAACGATCTCAGTGCACAAATTGGAACATTTGATCGTTCCCAGATTCTGTTGATT 157898 Query 66112 ACTCTTGCGATTGCATGCATCCT 66134 |||||| ||| |||||||||| Sbjct 157899 ACTCTTCGAATTACATGCATCCT 157921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397546622271680