Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pristionchus_20pacificus_20[genbank_20GCA_5F000180635.2_202015-04- 03] 13,758 sequences; 133,113,749 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq11825 84.2 6e-14 >seq11825 Length=27817 Score = 84.2 bits (92), Expect = 6e-14 Identities = 65/77 (84%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 9 AAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGT 68 ||||||||||||||||| | |||||||||||| ||||||||||| | ||||||||||| Sbjct 865 AAGAATAAGCACCGGCT---TCCGTGCCAGCAGCAGCGGTAATACGGAAGGTGCAAGCGT 809 Query 69 TAATCGGAATTACTGGG 85 || ||| ||| |||| Sbjct 808 TATTCGATTTTAGTGGG 792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289422576832