Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq183 136 7e-30 >seq183 Length=20465 Score = 136 bits (150), Expect = 7e-30 Identities = 163/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACA 172 || |||||||||||||||||||||||||||| | |||| |||||||||||||| || | Sbjct 15380 GCGATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACAATGTAGT 15321 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232 |||| | | |||| | ||| | |||| ||||||| | | |||| | ||| Sbjct 15320 GAGC-ATCATGTTCCTG--CTTCGAGAGAAG---TGGGTAAACCTTGAAAACATTA-CGT 15268 Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292 |||| || |||||||||| || | |||||||||| || ||||| |||| || Sbjct 15267 AACTGGGAGTGAAACTTGCAATTATGTTTCATGAACGAGGAATTCCAAGTAAACGCGAGT 15208 Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||| ||| |||||||||||||||||||||||| Sbjct 15207 CATTAGCTCGCATTGATTACGTCCCTGCCCTTTGTA 15172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947195538688