Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhabditophanes_20sp._20KR3021_20[genbank_20GCA_5F000944355.1_202014- 09-24] 471 sequences; 47,267,908 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq183 214 5e-53 >seq183 Length=20465 Score = 214 bits (236), Expect = 5e-53 Identities = 306/426 (72%), Gaps = 45/426 (11%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16293 ATTGGGTAATTTTCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 16352 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 |||||||| ||||||||| |||| |||||| |||| | |||||||||||||| || ||| Sbjct 16353 TCTCCGGAGTCGAACCCTGATTCTCCGTTATCCGTCAACACCATGGTAGGCCAATACCCT 16412 Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCG 252 ||||||||||||||||| ||||| | || || ||| || | | | | | Sbjct 16413 ACCATCGAAAGTTGATAAAGCAGATACTT--AT---------ACGG--CATGACTACGTG 16459 Query 253 ATTCGTT-----AAGTTATTATGAATC-ACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTA 306 | | ||| ||| |||| ||| || ||||| || ||| | Sbjct 16460 AGTAGTTCAGCAAAGATATTTTGAGTCAACCAA---------------TTTCTAGTTTAA 16504 Query 307 TCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTAC 366 || |||||| |||| | || || || | | || ||||||||||| |||||||| Sbjct 16505 TCAAATAAACGCACC---ACGGATGT-GGCTTAGATTGCGTGTATTAGCTCAAGAATTAC 16560 Query 367 CACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATT 426 | | |||||||| ||| | | | | |||| ||| ||| | |||||||| | Sbjct 16561 CTCAGTTATCCAACTAGGGAATT--TGCCGTGTAAATTATAGCTGTTATAATGAGCTTTC 16618 Query 427 CGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486 ||| ||||||| || || | || |||| | |||||||||||||||||||||| | || Sbjct 16619 CGCGGTTTCAC-GT---GAACG-TTGTACTGATACATGCATGGCTTAATCTTTGAAATAA 16673 Query 487 GCATAT 492 ||| || Sbjct 16674 GCACAT 16679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510392886016