Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq11573 340 3e-91 seq12543 197 3e-48 >seq11573 Length=6636 Score = 340 bits (376), Expect = 3e-91 Identities = 270/322 (84%), Gaps = 2/322 (1%) Strand=Plus/Plus Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGA 74 |||||||||||| |||||| ||| |||||||||||||||||||| | || || | |||| Sbjct 3728 GGGTGAAATAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCAGCGTAATGCTGTGA 3787 Query 75 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTT 134 |||||||||||||||||||||||||||||||||| | | || ||||||||||||| || Sbjct 3788 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAATTTT-ACTAGCGAGGTTAAGGTATT 3846 Query 135 CAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGA 194 || ||| ||||| || ||||||||| || || |||||| |||| || | |||| Sbjct 3847 AAGTACCGG-AGCCGGAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTAGTAGGATTAGA 3905 Query 195 CGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGA 254 ||||||||||||||||||||||| | ||||||||||| |||||| | ||||||| Sbjct 3906 CGCGAAACCTTGTGATCTACCCATGGGCAGGTTGAAGCTCTGGTAACACAGAGTGGAGGA 3965 Query 255 CCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAAT 314 |||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct 3966 CCGAACCGGTTGACGTTGAAAAGTCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCAAT 4025 Query 315 CAAACTGGGAAATAGCTCGTAC 336 |||||||||| ||||||||||| Sbjct 4026 CAAACTGGGAGATAGCTCGTAC 4047 >seq12543 Length=5972 Score = 197 bits (218), Expect = 3e-48 Identities = 241/325 (74%), Gaps = 9/325 (3%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | | Sbjct 2929 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 2987 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129 |||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || |||| Sbjct 2988 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 3045 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | ||| || || || ||||||||| | || |||||| ||||| ||| Sbjct 3046 CGTATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 3100 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| || Sbjct 3101 GTAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 3160 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| |||||||||||||| |||||| | || ||||||||||||| Sbjct 3161 GAGGTCCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 3220 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || ||||| |||||||||| || Sbjct 3221 CTAAACAAACCTGGAAATAGCTGGT 3245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972191640064