Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq365 167 4e-39 seq11937 131 3e-28 >seq365 Length=63520 Score = 167 bits (184), Expect = 4e-39 Identities = 178/228 (78%), Gaps = 9/228 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||| | Sbjct 45054 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCACGCTTACTAGATATT-C 45111 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| ||| ||| |||| ||||| || |||| | ||||| | | ||| ||||| Sbjct 45112 CTCGTTCAAGGGCAATAATTCCAATGCCCTGTCCCAAGCACGAAAATAATTCGT-GATTA 45170 Query 121 CCCGGACCTGTCGGCCAAGGT---GATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 || | | | | | || ||| |||| | || || | ||| ||||||||||||| Sbjct 45171 CCGAGTCTTCCCAGACACGGTTTCGATACATTC--TGCTACCTTCATTGTAGCGCGCGTG 45228 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 | |||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 45229 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 45275 >seq11937 Length=6370 Score = 131 bits (144), Expect = 3e-28 Identities = 195/284 (69%), Gaps = 61/284 (21%) Strand=Plus/Plus Query 4 CAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTC 63 ||||||||||||||||| ||| || | ||| |||||| | | ||||||||||||| |||| Sbjct 1837 CAAAGGGCAGGGACGTAATCAGCGTGGGCT-GATGACCCACACTTACTAGGAATT-CCTC 1894 Query 64 GTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACC 122 ||| | | | | |||| ||| | | ||||||||||||||||| ||||| ||||||||| Sbjct 1895 GTTCATGGGCGATAATTACAAAGCCCAATCCCCATCACGATGAAGTTTCATAAGATTACC 1954 Query 123 C----------------GGACCT-----GTCGGCCA-------------------AGGTG 142 | | |||| || ||||| || Sbjct 1955 CAATCCTTTCGGAACAGGAACCTTACTAGTTGGCCAGCCAAAGACTAAACCAACCAGCAA 2014 Query 143 AT----AGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA----- 193 || | ||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct 2015 ATTAGAAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC 2074 Query 194 ---------AGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||| Sbjct 2075 ATCACAGACAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751544417955