Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq11573 185 8e-45 seq12543 120 3e-25 >seq11573 Length=6636 Score = 185 bits (204), Expect = 8e-45 Identities = 145/173 (84%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 || ||||||||||||| || ||||||| |||||||||| |||||||||||||||| |||| Sbjct 3279 GGCGGATGCCTAGGCTTTCAGAGGCGACGAAGGACGTGGTAAGCTGCGAAAAGCTGCGGG 3338 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||| ||| Sbjct 3339 GATTGGCACACACGAATTGATCCGCAGATATCCGAATGGGGCAACCCGGCATGTTGAAGA 3398 Query 128 TATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || ||| ||| || | || ||| || ||||||||||||||||||| Sbjct 3399 CATGTCACCTCGCAAGAGG---AGCAAACCCGGAGAACTGAAACATCTAAGTA 3448 >seq12543 Length=5972 Score = 120 bits (132), Expect = 3e-25 Identities = 140/182 (77%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || |||||| |||||||| | || ||||||||||||||||| Sbjct 2461 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGCGGTAGCCTGCGAAAAGCTACGGG 2520 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT-ATATTGGA 125 || ||||| | | | ||||||||||||| ||||||||||| ||||| | | ||||| Sbjct 2521 GAGCTGGCAAACAAGCTTTGATCCGTAGATGTCCGAATGGGGAAACCCACTCCTTTTGGA 2580 Query 126 G-AT--ATATCATAACGC-TAGGC---GTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 | || || | || | ||||| | | ||||||| || ||||||||||||||||| Sbjct 2581 GTATCCATGGCTGAATACATAGGCCATGCGAAGCGAACGCGGTGAACTGAAACATCTAAG 2640 Query 179 TA 180 || Sbjct 2641 TA 2642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476511141597