Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq11573 127 3e-27 seq12543 111 2e-22 >seq11573 Length=6636 Score = 127 bits (140), Expect = 3e-27 Identities = 173/242 (71%), Gaps = 21/242 (9%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || |||||| | ||| | | || ||| Sbjct 4992 CTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAGCATCTTTCGAT-TTAGCAG 4934 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | || ||| ||||| ||| || ||| Sbjct 4933 AGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACTGCGGCCAACATT-GCT-- 4877 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 ||| ||| | ||||| ||||||||||| | | |||||||| | Sbjct 4876 -------GTT----------GGCGTCTCTTCTTCCGAAGTTACGAGACTATTTTGCCTAG 4834 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| |||| |||| ||| | |||||| ||||||| | |||||||||||||||| Sbjct 4833 TTCCTTAGCCACGACTCACTCGAGCACCTTAGGATTCTCTCCTCGACCACCTGTGTCGGT 4774 Query 241 TT 242 || Sbjct 4773 TT 4772 >seq12543 Length=5972 Score = 111 bits (122), Expect = 2e-22 Identities = 176/249 (71%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 ||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 4274 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 4216 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCAC--CACCA-----GCTC 119 ||||||||| ||||||||||| || | || ||| ||| | |||| || | Sbjct 4215 GTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCCTTCACCCTTCTGGCGC 4156 Query 120 AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 | | || | | || ||| |||| |||||||||||||| ||| |||||||| Sbjct 4155 GAGCCA--GTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTACGGTACCAATTTGCCGA 4098 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| || ||||| | | | |||||||| || ||| | | ||||||||||||| Sbjct 4097 GTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCCCACCTGTGTCGG 4038 Query 240 TTTACGGTA 248 ||| ||||| Sbjct 4037 TTTGCGGTA 4029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693979313601