Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq11573 105 7e-21 seq12543 80.6 3e-13 >seq11573 Length=6636 Score = 105 bits (116), Expect = 7e-21 Identities = 129/172 (75%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || |||| | || || |||||| ||| |||||| || || ||||| Sbjct 4772 AAACCGACACAGGTGGTCGAGGAGAGAATCCTAAGGTGCTCGAGTGAGTCGTGGCTAAGG 4831 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 ||||||||||| | | |||||||| ||| ||| | | | | ||| ||| | || Sbjct 4832 AACTAGGCAAAATAGTCTCGTAACTTC-GGAAGAAGAGACGCCA-ACAGCAAT-GTTGGC 4888 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| ||| ||| |||||| |||||||| |||||||||||| || ||| || Sbjct 4889 CGCAGTGAAGAGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCTAA 4940 >seq12543 Length=5972 Score = 80.6 bits (88), Expect = 3e-13 Identities = 76/97 (78%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| || | || | ||| ||| |||||||||||||| ||| || | Sbjct 4032 CGCAAACCGACACAGGTGGGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCGGGAGA 4091 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||| |||||| || | ||||||||||||||| Sbjct 4092 AGGAACTCGGCAAATTGGTACCGTAACTTCGGGATAA 4128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530878184598