Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq12543 156 4e-36 seq11573 100 3e-19 >seq12543 Length=5972 Score = 156 bits (172), Expect = 4e-36 Identities = 91/94 (97%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4192 GCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 4251 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||||||||| |||| ||||| Sbjct 4252 TGACGCCTGCCCGGTGCCGGAAGATTAAATGATG 4285 >seq11573 Length=6636 Score = 100 bits (110), Expect = 3e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| |||||||||||| |||||||||| ||||||| || |||||| | ||||| Sbjct 4899 AGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCTAAATCGAAAGATGCTGTATA 4958 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| |||| |||||||||||| |||||||||| Sbjct 4959 GGGTCTGACACCTGCCCGGTGCTGGAAGGTTAA 4991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476511141597