Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq12543 457 3e-126 seq11573 444 2e-122 seq30786 93.3 1e-16 >seq12543 Length=5972 Score = 457 bits (506), Expect = 3e-126 Identities = 400/496 (81%), Gaps = 5/496 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct 1227 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 1286 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||| ||||||||| |||||||||| ||||||||| | |||||||| || || ||| Sbjct 1287 GTGGATTAATTCGATGCAACGCGAAAAACCTTACCTACCCTTGACATGGTCGGAATCCTG 1346 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||| || | | | | | || | ||||||| ||||||| ||||||||| Sbjct 1347 CTGAGAGGTGGGAGTGCTCGAAAGAGAACCGGCGCACAGGTGCTGCATGGCTGTCGTCAG 1406 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1407 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGTTGC 1466 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 | ||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1467 TACGC--AAGA---GCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 1521 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||| || ||||| |||||||| | ||||| ||||||| |||||||| | || Sbjct 1522 GACGTCAAGTCCTCATGGCCCTTATGGGTAGGGCTTCACACGTCATACAATGGTCGGAAC 1581 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 | |||| || || |||||||| ||| ||||||| ||| | || ||| ||||||| Sbjct 1582 AGAGGGTTGCCAACCCGCGAGGGGGAGCTAATCCCAGAAAACCGATCGTAGTCCGGATTG 1641 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| | Sbjct 1642 CACTCTGCAACTCGAGTGCATGAAGCTGGAATCGCTAGTAATCGCGGATCAGCATGCCGC 1701 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 1702 GGTGAATACGTTCCCG 1717 >seq11573 Length=6636 Score = 444 bits (492), Expect = 2e-122 Identities = 404/500 (81%), Gaps = 13/500 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 2008 TACGAACGCAAGTTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGATTAT 2067 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTC--TGACCCC 118 |||||||||||||| | |||||| |||||||||||| ||| | || |||| Sbjct 2068 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCAAGGCTTAA-ATGGGAAATGACAGG 2126 Query 119 TCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 | |||| ||||| |||| ||||| ||| | ||||| ||||||||||||||| Sbjct 2127 TTTAGAAATAGACTTTTC---TTCGG---ACATTTTTCAAGGTGCTGCATGGTTGTCGTC 2180 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| |||| |||||||||| |||||||||||||||| | ||||| Sbjct 2181 AGCTCGTGCCGTGAGGTGTTAGGTTAAGTCCTGCAACGAGCGCAACCCCTGTCACTAGTT 2240 Query 239 GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGG 297 ||||||||||||||||| |||||| ||||||| | ||| | |||||||||||| Sbjct 2241 GCCATCATTAAGTTGGGGACTCTAGTGAGACTGCCTACG-CAAGTAGAGAGGAAGGTGGG 2299 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || ||||||||||||||| | |||||| | |||||| |||||||| |||||||| | Sbjct 2300 GATGACGTCAAATCATCACGGCCCTTACGCCTTGGGCCACACACGTAATACAATGGCCGG 2359 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 |||| |||||||| | || |||| || | ||||||| | |||| | |||||||||||| Sbjct 2360 TACAGAGGGCAGCTACACTGCGAAGTGATGCAAATCTC-GAAAGCCGGTCTCAGTTCGGA 2418 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATG 476 ||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct 2419 TTGGAGTCTGCAACTCGACTCTATGAAGCTGGAATCGCTAGTAATCGCGCATCAGCCATG 2478 Query 477 CTACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 2479 GCGCGGTGAATACGTTCCCG 2498 >seq30786 Length=1356 Score = 93.3 bits (102), Expect = 1e-16 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| Sbjct 1077 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATTC 1136 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | | |||||| | || ||| | || | |||| |||| || ||| | | | | | || Sbjct 1137 CTAAACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAATAGGATATAAATT 1196 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||| ||||||| |||||||||||||||| | ||| ||||||||||| ||| Sbjct 1197 TTAAGGATTATAGTCTGAAACTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 1256 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 1257 ACCATGTCACGGTGAAT 1273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503059443520