Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq365 237 3e-60 seq11937 233 3e-59 >seq365 Length=63520 Score = 237 bits (262), Expect = 3e-60 Identities = 206/250 (82%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 45209 CCTTCATTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 45268 Query 73 CTCAAACT--TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCA 129 |||| || | || ||| || | |||||||||||||| |||| || | | Sbjct 45269 -TCAATCTCGTGCA---GCTAATTGCTGCTTGTCCCTCTAAGAAGGTCGCCATACAGCAA 45324 Query 130 TAGTCGATGGGGC-TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || ||| || || |||| ||| || ||||||||||||||||||||||||||||| Sbjct 45325 AAGAATTTGGCGCCTAGTTAGTAGGCTAGAATCTCGTTCGTTATCGGAATTAACCAGACA 45384 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||| Sbjct 45385 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCGAGAAAGAGCTA 45444 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 45445 TCAATCTGTC 45454 >seq11937 Length=6370 Score = 233 bits (258), Expect = 3e-59 Identities = 221/282 (78%), Gaps = 30/282 (11%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2023 ACTCGCTGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2082 Query 62 C--------------CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCT 107 | ||||||||||||||||||||| ||||| | |||| ||| || Sbjct 2083 CAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTCTGGCTAAACGCCAGCTGTCTCT 2142 Query 108 CTAAGAA----GCCAGCCAC------CAAC-CATAGTCGATGGGGCTATTTAGCAGGTTA 156 ||||||| | || || ||| || || | | | || ||||||| || Sbjct 2143 CTAAGAACTTGGAAAGATACTTTACACAAGGCAAAGCCCAAG----TAATTAGCAGAGTA 2198 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 2199 AGGTCTCGTTCGT-ATCGGAATTAACCAGACAAATCAATCCACGAACTAAGAACGGCCAT 2257 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| | ||||||||||||||| |||||||||| Sbjct 2258 GCACCACCACCCTCAAAATCAAGAAAGAGCTTTCAATCTGTC 2299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796317276897