Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq12543 188 1e-45 seq11573 188 1e-45 >seq12543 Length=5972 Score = 188 bits (208), Expect = 1e-45 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | ||||||||||||||||||||| |||||||||| |||||||||| Sbjct 4638 GGGACAGTGCATGGTAGGCAGTTTGACTGGGGCGGTCTCCTCCCAAAGCGTAACGGAGGA 4697 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | | ||| ||| || | || ||||| | ||| | ||||||| |||| ||| ||| Sbjct 4698 GTACGAAGGTACGCTAGGTACGGTCGGAAATCGTGCTGATAGTGCAATGGCATAAGCGTG 4757 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 || ||||||| ||| |||||| |||||| |||||| || | || |||||||| ||| Sbjct 4758 CTTAACTGCGAGACCGACAAGTCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGT 4817 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| |||| |||||| ||||||||||| ||| ||||||||| Sbjct 4818 TCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTGGGGATA 4866 >seq11573 Length=6636 Score = 188 bits (208), Expect = 1e-45 Identities = 170/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185 ||| ||||||||||||| |||||||||| |||||||||||||||| ||||| |||||| Sbjct 5390 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTTCAAAGGTACCCT 5449 Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245 |||| | ||| |||| |||| | |||| || |||| ||||||| ||||||| || ||| Sbjct 5450 CAGCACGCTTGGTAACCGTGCGTAGAGTGTAATGGCATAAGGGTGCTTGACTGTGAGACC 5509 Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305 |||||| | |||| |||||| || | || |||||||| ||| | | |||||| ||| Sbjct 5510 TACAAGTCGATCAGGTGCGAAAGCAGGACATAGTGATCCGGTGGTTCCGTATGGAAGGGC 5569 Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| ||||||||| ||| | ||||||| Sbjct 5570 CATCGCTCATAGGATAAAAGGTACTCCGGGGATA 5603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981785636512