Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq11573 221 2e-55 seq12543 188 1e-45 >seq11573 Length=6636 Score = 221 bits (244), Expect = 2e-55 Identities = 231/301 (77%), Gaps = 7/301 (2%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| | || |||||||| |||||| || |||||||||||||||||||||||| Sbjct 1520 GCTGGATCAGGCTCTCACCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCT 1461 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| ||| ||||| | ||| |||||||| || ||| |||||| | Sbjct 1460 GGTCCGTGTCTCAGTACCAGTGTGGGGGATCACCCTCTCAGGCCCCCTAAAGATCGTAGA 1401 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT---TTCAGCG 183 ||||||| || ||| ||||||||||| |||||| |||| |||||||| | || || Sbjct 1400 CTTGGTGAGCCGTTACCTCACCAACTATCTAATCTTGCGCGTGCCCATCTCTATCCACCG 1341 Query 184 ATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTT 243 | ||| | |||||||||||||| | | |||||| ||||||| ||| || Sbjct 1340 ---GAGTTTTCAATACCGAATGATGCCATCCAGT-ATATTATGGGGTATTAATCTTCCTT 1285 Query 244 TCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCAC 303 || ||| | ||| || | ||||||||||||| |||||||| | ||||||| |||| | Sbjct 1284 TCGAAAGGCTATCCCCCAGATAAAGGCAGGTTGCACACGTGTTCCGCACCCGTACGCCGC 1225 Query 304 T 304 | Sbjct 1224 T 1224 >seq12543 Length=5972 Score = 188 bits (208), Expect = 1e-45 Identities = 140/164 (85%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| ||| || ||||||||||||||||||||| Sbjct 738 GGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAG 679 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| || ||||| ||| Sbjct 678 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCTACTGAT 619 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCC 164 ||||| |||||| ||| ||| | ||||||||| |||||| ||| Sbjct 618 CGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATCAGCC 575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997775630592