Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq12543 168 2e-39 seq11573 95.1 3e-17 >seq12543 Length=5972 Score = 168 bits (186), Expect = 2e-39 Identities = 285/406 (70%), Gaps = 19/406 (5%) Strand=Plus/Minus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| || || ||| | | | Sbjct 3805 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 3746 Query 64 GAACCCTTGGATAATCGGCGGACGGGA--TTCCCACCCGTCACACGCTACTCATGCCTGC 121 ||| |||||| ||||| ||| ||| | ||| | | ||||||||||| | || Sbjct 3745 GAAACCTTGGGCTTACGGCGAGGGGGCCTTTCACCCCCTTTAT-CGCTACTCATGTCAGC 3687 Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180 |||| |||| | | ||||| ||| | | || |||| |||| | || || || Sbjct 3686 ATTCGCACTTCCGATACCTCCAGCACCCTTT-ACAAGGCACCTTCGCAGGCTTACGGAAC 3628 Query 181 GCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 |||| |||||| || ||| || || ||||||||| ||| |||| || Sbjct 3627 GCTCTCCTACCATGCGTGCTAAGCACGCAT----CCGCAGCTTCGGTATATAGCTTA-GC 3573 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| ||||| || |||| | | ||| || |||||||||||||||| ||||| |||| Sbjct 3572 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGG 3513 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| |||||||||||||| ||| | || |||| || ||||||||| | Sbjct 3512 GTGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 3453 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | | || ||| ||||||||| | |||||| ||||||||||| Sbjct 3452 G-CTATATTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 3408 >seq11573 Length=6636 Score = 95.1 bits (104), Expect = 3e-17 Identities = 120/163 (74%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 241 ATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGCTG 299 |||||| || | | | || ||| |||||||| ||||||||||||| || || |||||| Sbjct 4368 ATTATCCATGCCGGACCGCTCGACTAGTGAGCTGTTACGCACTCTTTAAATGAATGGCTG 4309 Query 300 CTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC--CCACTGAGTCAC 357 ||||||||||||| |||| | |||| | ||| | || | || | | ||| | Sbjct 4308 CTTCCAAGCCAACATCCTAGCTGTCAATGCAGTCCAACCGCGTTGCTTCAACTTAACATA 4249 Query 358 CACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | || ||| ||||||||| || |||||| | ||||||||||| Sbjct 4248 TATTTTGGGACCTTAGCTGTTGGTCTGGGTTCTTTCCCTCTCG 4206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176863564288