Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq12543 237 1e-60 seq11573 114 1e-23 >seq12543 Length=5972 Score = 237 bits (262), Expect = 1e-60 Identities = 149/161 (93%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| Sbjct 1656 TCGAGTTGCAGAGTGCAATCCGGACTACGATCGGTTTTCTGGGATTAGCTCCCCCTCGCG 1597 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1596 GGTTGGCAACCCTCTGTTCCGACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 1537 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||||||||||||||||||||||||||||| Sbjct 1536 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 1496 >seq11573 Length=6636 Score = 114 bits (126), Expect = 1e-23 Identities = 116/150 (77%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||| ||| || ||||| | |||| || | | |||| Sbjct 2436 TCGAGTTGCAGACTCCAATCCGAACTGAGACCGGCTTTC-GAGATTTGCATCACTTCGCA 2378 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| ||||||||| ||||||| |||| | | |||||||| Sbjct 2377 GTGTAGCTGCCCTCTGTACCGGCCATTGTATTACGTGTGTGGCCCAAGGCGTAAGGGCCG 2318 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || ||||||||||||||||||||||| Sbjct 2317 TGATGATTTGACGTCATCCCCACCTTCCTC 2288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415747975890