Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq11573 201 2e-49 seq12543 190 3e-46 >seq11573 Length=6636 Score = 201 bits (222), Expect = 2e-49 Identities = 216/283 (76%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| | |||||||||||| || || || | |||||||| | |||||| Sbjct 1895 CCCACGCTTTCGTCCATCAGCGTCAGTTGTTGCTTAGTAACCTGCCTTCGCAATTGGTGT 1836 Query 61 TCCTCCGTA-TATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 || | ||| |||||| ||||||||||||||||| ||||| | | || || || Sbjct 1835 TC-TAAGTAATATCTATGCATTTCACCGCTACACTACTTATTCCAGCTACTTCAACAACA 1777 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||||| |||| |||| |||| | ||| ||| || |||||| ||||| Sbjct 1776 CTCAAGACCTGCAGTATCAATGGCAGTTTCACAGTTAAGCTGTGAGATTTCACCACTGAC 1717 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || | |||||||| ||||||| |||||||||||||||||||||||||| ||| | Sbjct 1716 TTACAGATCCGCCTACGGACCCTTTAAACCCAATAAATCCGGATAACGCTTGCACCCTCC 1657 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||||| ||||||||| |||||||| Sbjct 1656 GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTC 1614 >seq12543 Length=5972 Score = 190 bits (210), Expect = 3e-46 Identities = 216/290 (74%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| | |||| | |||||||||| ||| | Sbjct 1112 CCCACGCTTTCGTGCATGAGCGTCAGTATTGGCCCAGGGGGCTGCCTTCGCCATCGGTAT 1053 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||| ||||||| ||||||| ||||| | || Sbjct 1052 TCCTCCACATCTCTACGCATTTCACTGCTACACGTGGAATTCTACCCCCCTCTGCCATAC 993 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || |||| | ||||||| |||||||||| | ||||||||| | || Sbjct 992 TCTAGCCTGCCAGTCACCAATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCGGTCT 933 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| | | | |||||| |||| ||| |||| ||||||| || |||||| Sbjct 932 TAGCAAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTACG 873 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||||||| || |||| Sbjct 872 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCCGGTA 823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828297890427