Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq12543 190 1e-46 seq11573 132 3e-29 >seq12543 Length=5972 Score = 190 bits (210), Expect = 1e-46 Identities = 126/140 (90%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| Sbjct 4855 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTG 4796 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| | |||| | ||||||| | |||||| ||| |||||||||||||| Sbjct 4795 CTTTCGCACCTGCTCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTAT 4736 Query 121 CACTACGATTTCCGACCGTA 140 || |||||||||||||||| Sbjct 4735 CAGCACGATTTCCGACCGTA 4716 >seq11573 Length=6636 Score = 132 bits (146), Expect = 3e-29 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| ||||||||||||||||||| | | |||||||||||||||| |||| Sbjct 5592 TACCTTTTATCCTATGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTG 5533 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||||| ||| || | |||| | |||| || |||||||| ||| ||||||| |||| Sbjct 5532 CTTTCGCACCTGATCGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCCATTACACT 5475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351793627900