Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq11937 185 9e-45 seq365 109 6e-22 >seq11937 Length=6370 Score = 185 bits (204), Expect = 9e-45 Identities = 155/187 (83%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 7 AGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT----GCTCGAATACA 62 || |||||||||||||||||||||||| ||||||||||||| || ||| ||||| Sbjct 2847 AGCACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGTTTACAGCTTGAATATC 2788 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 ||| ||||||||||||||||||||| | | ||||||||||| |||||||||||| Sbjct 2787 TTAGCATGGAATAATAGAATAGGACTTTAG-TTCTATTTTGTTGGTTTCTAGGACTAGA- 2730 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||||||| ||||| | |||||| ||||||| ||||||||||||| Sbjct 2729 GTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTGATTGTCAGAGGTGAAATTCTT 2670 Query 183 GGATTTA 189 |||||| Sbjct 2669 AGATTTA 2663 >seq365 Length=63520 Score = 109 bits (120), Expect = 6e-22 Identities = 134/178 (75%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT-TGCTCGAATACATTACCA 68 || ||||||||||||||||||||| | | |||||| || || ||| ||||| | | || Sbjct 45944 ACGTTTACTTTGAAAAAATTAGAGTGCTTAAAGCAAGCTTTACGCTTGAATATAGT-GCA 45886 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||| ||||| ||||||||| | ||| || |||||| |||||| | ||| | |||||| Sbjct 45885 TGGGATAATGGAATAGGAC-TTTGGTCCTCTTTTGTTGGTTTCGAAGACTG-AAGTAATG 45828 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || || | | | || |||||| | ||||| || | ||||||||||||||||| Sbjct 45827 ATTAAGAGGAACAGACGGGGGCATTCGTATTGCTGCGTTAGAGGTGAAATTCTTGGAT 45770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511689816480