Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq365 190 4e-46 seq11937 136 7e-30 >seq365 Length=63520 Score = 190 bits (210), Expect = 4e-46 Identities = 203/262 (77%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGA--AGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||| | | || || | || | || ||||| ||||||||||||||| Sbjct 45309 CTTCTTAGAGGGACAAGCAGC--AATTAGCTGCACGAGATTGAG-CAATAACAGGTCTGT 45253 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||| | |||| |||||||||||||| ||| | || || | ||| Sbjct 45252 GATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACAATGAAGGTAGCA--GAATGTATC 45195 Query 190 ---ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 ||| || | || | | || ||||||| | || | ||||||| |||| || || Sbjct 45194 GAAACCGTGTCTGGGAAGACTCGGTAATCACG--AATTATTTTCGTGCTTGGGACAGGGC 45137 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||| ||||||||| ||| |||||||||| |||||||||| | ||||| ||| |||||| Sbjct 45136 ATTGGAATTATTGCCCTTGAACGAGGAATATCTAGTAAGCGTGAGTCATAAGCTCGCGTT 45077 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 45076 GATTACGTCCCTGCCCTTTGTA 45055 >seq11937 Length=6370 Score = 136 bits (150), Expect = 7e-30 Identities = 210/313 (67%), Gaps = 59/313 (19%) Strand=Plus/Minus Query 73 TTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||| ||| ||| | |||| ||||||||||||||||||||||||||||| Sbjct 2149 TTCTTAGAGAGACAGCTGGCGTTTAGCCAGAGGAAGTTTGAGGCAATAACAGGTCTGTGA 2090 Query 132 TGCCCT--------------TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCC 177 |||||| ||||||||||||||||||||||||||||||||| || | Sbjct 2089 TGCCCTGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTC 2030 Query 178 AACGAGTTCATCA-------------------CCTTGGCCGG------------------ 200 | |||||| | | ||||| || Sbjct 2029 AGCGAGTTTTCTAATTTGCTGGTTGGTTTAGTCTTTGGCTGGCCAACTAGTAAGGTTCCT 1970 Query 201 -------AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 |||| ||||||||||| | ||||| ||||| ||||||| | || ||| || Sbjct 1969 GTTCCGAAAGGATTGGGTAATCTTATGAAACTTCATCGTGATGGGGATTGGGCTTTGTAA 1910 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 |||| || | | |||||||||| ||||||||| | | ||||||||| | || |||||||| Sbjct 1909 TTATCGCCCATGAACGAGGAATTCCTAGTAAGTGTGGGTCATCAGCCCACGCTGATTACG 1850 Query 314 TCCCTGCCCTTTG 326 ||||||||||||| Sbjct 1849 TCCCTGCCCTTTG 1837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946607649536