Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq12543 345 8e-93 seq11573 192 1e-46 >seq12543 Length=5972 Score = 345 bits (382), Expect = 8e-93 Identities = 272/322 (84%), Gaps = 3/322 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||| | Sbjct 2452 AGTGCATGTGGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGCGGTAGCCTGCGAAA 2511 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||||| |||||||||| |||| ||||||||||||||||| Sbjct 2512 AGCTACGGGGAGCTGGCAAACAAGCTTTGATCCGTAGATGTCCGAATGGGGAAACCCACT 2571 Query 121 CCTTTGGGTCATTGCATG-CTGAATACATAGGT-ATGCAAAGCGAACGCGGCGAACTGAA 178 ||||| || | |||| ||||||||||||| |||| |||||||||||| |||||||| Sbjct 2572 CCTTTTGGAGTATCCATGGCTGAATACATAGGCCATGCGAAGCGAACGCGGTGAACTGAA 2631 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2632 ACATCTAAGTAACCGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 2691 Query 239 ATGGGATGAGCCTT-TACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGC 297 |||||||||||||| || || ||| |||| ||| ||| ||||||||| | || Sbjct 2692 ATGGGATGAGCCTTGCACTCTTTATTTGTATTGTTAGCCGAACGCTCTGGAAAGTGCGGC 2751 Query 298 CATAGCGGGTGATAGCCCCGTA 319 |||||| ||||||||||| ||| Sbjct 2752 CATAGCAGGTGATAGCCCTGTA 2773 >seq11573 Length=6636 Score = 192 bits (212), Expect = 1e-46 Identities = 233/313 (74%), Gaps = 16/313 (5%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||| |||||||| ||| | | |||||| ||||||||| ||| ||||| |||||||| Sbjct 3277 ATGGCGGATGCCTAGGCTTTCAGAGGCGACGAAGGACGTGGTAAGCTGCGAAAAGCTGCG 3336 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||| || ||| |||| ||||||||||||| ||||||||||| |||||||| ||| Sbjct 3337 GGGATTG-GCACACACGAATTGATCCGCAGATATCCGAATGGGGCAACCCGGCATGTTGA 3395 Query 128 -GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| || | | | ||| ||| ||| ||| |||||||||||||||| Sbjct 3396 AGACATGTCACCTCGCA---AGAGG-------AGCAAACCCGGAGAACTGAAACATCTAA 3445 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||| | | ||||||||||||| | |||||||| |||||||||||||||||| |||| Sbjct 3446 GTACCCGGAGGAAAAGAAATCGA-AGAGATTCCGTAAGTAGTGGCGAGCGAAAGCGGATT 3504 Query 247 AGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGG 306 |||| | | | || || || | |||| |||||||| | |||||||| ||| Sbjct 3505 AGCCCAAAAG---TCTTTTTATGTTTAATAGAATGTTCTGGAAAGAACAGCCATAGAGGG 3561 Query 307 TGATAGCCCCGTA 319 ||||||||||||| Sbjct 3562 TGATAGCCCCGTA 3574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917825660192