Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq11573 342 2e-91 seq12543 340 6e-91 >seq11573 Length=6636 Score = 342 bits (378), Expect = 2e-91 Identities = 363/472 (77%), Gaps = 15/472 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||| ||||||||| ||||| ||| |||||||| | | | || || Sbjct 5519 TCGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCCATTACACTCTACGCACGGTTACC 5460 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||||||| ||||||| ||||||||||| ||| ||||| | ||| |||||| Sbjct 5459 AAGCGTGCTGAGGGTACCTTTGAAAGCCTCCGTTACTCTTTTGGAGG-CGACCACCCCAG 5401 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| ||| ||||| | || | | | ||||| | | Sbjct 5400 TCAAACTACCCACCACGCAATGTCCTT----CTGA--AAG-----AAGTTAGGCTCCAAG 5352 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || | || ||||||||||||| || |||||||| |||||||||| | || ||| || Sbjct 5351 TAAGTAAAGGGTGGTATTTCAACGTCGGCTCCACAAACACTAGCGTGCCTGCTTCAAAGC 5292 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||||||||||||||||| | || || | |||||| ||| |||||| ||||| | Sbjct 5291 CTCCCACCTATCCTACACATTACTTACTCAAAGTCAATACGAAGTTATAGTAAAGGTTCA 5232 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 | |||||||||||||| ||| | || ||||||| || |||| ||||||||||| Sbjct 5231 CAGGGTCTTTTCGTCCCATTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCG 5172 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 || |||| |||||||| | || ||||||| ||||||||||||||||||||||||| Sbjct 5171 AGCTCGTGGCTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACC 5113 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 5112 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 5061 >seq12543 Length=5972 Score = 340 bits (376), Expect = 6e-91 Identities = 417/566 (74%), Gaps = 25/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58 ||||||||| |||||||||| |||| | ||| ||| || |||| || ||| |||| Sbjct 4782 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAGCAC--GATTT 4725 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | || | ||||| | | |||||||||| ||||||||| | ||||||| Sbjct 4724 CCGACCGTACCTAGCGTACCTTCGTACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCC 4666 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| || |||| ||||||||||| |||| ||||| |||||||||||||| | Sbjct 4665 AGTCAAACTGCCTACCATGCACTGTCCCCGACCCGGATCACGGGCCAAGGTTAGAACCTC 4606 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | ||| |||||||||||| ||| |||||| |||||||| | | ||||| Sbjct 4605 AAACAAACCAGGGTGGTATTTCAAGGACGGCTCCACCGAAACTAGCGTTCCGGTTTCATA 4546 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | ||||||||||||||||||| | || | || ||||| | |||||| ||| ||||| Sbjct 4545 GCCTCCCACCTATCCTACACAGATCGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTT 4486 Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| |||||| | | ||||| | || ||| ||| ||| | Sbjct 4485 CATGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACACTTCAACTTCGC 4426 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || ||||||| || |||||||||||||||||||||||||||||||| Sbjct 4425 TGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 4366 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| || Sbjct 4365 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGACT 4306 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||||| | | || ||| ||| ||| |||| ||||| |||| Sbjct 4305 TCAATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCGGCAC 4265 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| || ||||| || Sbjct 4264 CGGGCAGGCGTCACACCCTATACGTC 4239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701335370112