Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Romanomermis_20culicivorax_20[genbank_20GCA_5F001039655.1_202014-01- 08] 62,537 sequences; 322,765,759 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq14759 131 3e-28 seq365 82.4 1e-13 >seq14759 Length=4751 Score = 131 bits (144), Expect = 3e-28 Identities = 105/126 (83%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| |||| | || |||||| ||||||| || |||| ||| |||| Sbjct 4100 GTACGAGAGGAACCGTTGAATC--GCATCATTGGTATTTGCGGTTGGCTGAACAGCCAGT 4043 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||| ||| | ||||||| ||||||||||||||||||| |||||| ||| | Sbjct 4042 GCCGCGAAGCTAACATGCGTTGGATTACGGCTGAACGCCTCTAAGTCGGAATCCGTGCTA 3983 Query 121 GAACGG 126 ||| || Sbjct 3982 GAAGGG 3977 >seq365 Length=63520 Score = 82.4 bits (90), Expect = 1e-13 Identities = 87/112 (78%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| |||||||| | ||||||| || | || ||| || || | Sbjct 38424 GTACGAGAGGAACCGCA-AATTCAGAC-ATTTGGTTTATGTGCTTGGTTGAAAAGCCAAT 38367 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | ||||| ||||||||||| ||||| |||||||||||||||| || || Sbjct 38366 GGCGCGAGGCTACCATCTGGCAAATTATAACTGAACGCCTCTAAGTTAGTAT 38315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818703706368