Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq22067 147 9e-33 seq15790 120 1e-24 seq1404 96.9 1e-17 seq3278 87.8 7e-15 seq1095 77.0 1e-11 >seq22067 Length=526 Score = 147 bits (162), Expect = 9e-33 Identities = 110/129 (85%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||||| |||||| ||||||||||||||||||||||| ||| || |||||||||| Sbjct 437 GAGCATGTATGTTGGTACCCGAAAGATGGTGAACTATGCTTGAGCAGAACGAAGCCAGAG 378 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||||| ||| |||||| || |||||||||| |||||| ||||| ||| Sbjct 377 GAAACTCTGGTGGAGGTTCGTAGCGGTGTTGACGTGCAAATCACTCGTCAGATTTGTGTA 318 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 317 TAGGGGCGA 309 >seq15790 Length=1885 Score = 120 bits (132), Expect = 1e-24 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 || ||| ||||||||||||||||||| ||| || ||||| ||||||||||||||||| Sbjct 556 GGTACCTGAAAGATGGTGAACTATGCTTGAGCAGAACGAAGCTAGAGGAAACTCTGGTGG 615 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||| |||||| || | |||||||| | |||| ||||| |||||||||||| Sbjct 616 AGGTTCGTAGCGGTGTTGACATGCAAATCACTAGTCAGATTTGTGTATAGGGGCGA 671 >seq1404 Length=30424 Score = 96.9 bits (106), Expect = 1e-17 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||||| |||||| ||||||||||||||||||||||| ||| || ||||||||| Sbjct 5884 GAGCATGTATGTTGGTACCCGAAAGATGGTGAACTATGCTTGAGCAGAACGAAGCCAGAA 5943 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| |||||||| | ||| ||| || ||| |||||| |||||| || || || Sbjct 5944 GAAACACTGGTGGAAGTTCGTGATGGTGTTGACGTACAAATCACTCGTCACATCTGTGTT 6003 Query 675 TAGGGG 680 || ||| Sbjct 6004 TATGGG 6009 >seq3278 Length=20233 Score = 87.8 bits (96), Expect = 7e-15 Identities = 87/113 (77%), Gaps = 6/113 (5%) Strand=Plus/Plus Query 577 AAGATGGTGAACTATGCCTGAATAG------GGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||| |||||||| |||| || | |||||| ||||||||||||| ||||| Sbjct 561 AAGATGGCGAACTATGTTTGAACAGAACGAAGCCGAAGCCGGAGGAAACTCTGGCGGAGG 620 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||| || |||| |||| |||||||||||| || |||||| || Sbjct 621 TTCGTAGCGGTGTTGACGTGATAATCACTCGTCAAATTTGTGTTTAGGGGTGA 673 >seq1095 Length=33648 Score = 77.0 bits (84), Expect = 1e-11 Identities = 84/112 (75%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 ||| |||||||||||| ||||| ||| | | |||||||||| |||||| |||| Sbjct 16698 CCCAAAAGATGGTGAATTATGCTTGAGTTGAACGAAGCCAGAGCGAACTCTAATGGAACT 16639 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | | ||||||| || ||||||||| | |||| | ||| |||| |||||| Sbjct 16638 TTGTAGCGGTTTTGACGTGCAAATAACTGGTCAGAATTGAGTATGAGGGCGA 16587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079520892800