Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Soboliphyme_20baturini_20[genbank_20GCA_5F000951395.1_202014-10-12] 22,336 sequences; 218,332,512 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5314 168 5e-37 seq4487 102 6e-17 >seq5314 Length=14302 Score = 168 bits (186), Expect = 5e-37 Identities = 255/363 (70%), Gaps = 0/363 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 ||||| ||| | || || || || | | ||| ||||| | || |||||||| |||| Sbjct 5341 TGGAAAATTTTTCACAAGAAGTTCAGGCGCTGGAAGCGCGATACTTTTACGGCTTTCAGA 5400 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 |||| |||| ||| | || || |||||||| | || |||||| | ||||||| Sbjct 5401 TTGCACTGGAAAATATACATTCTGAGATGTATTCGTTACTTATCGATGCTTACATCAAAA 5460 Query 61376 AGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGA 61435 | | || || | || ||||||| ||| |||| ||| | ||| |||||| || Sbjct 5461 ACCCCGCTCAAAGGGAGTTGCTGTTCAACGCCGTCGAAACGCTGCCGTGTGTGAAGAAGA 5520 Query 61436 AAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGC 61495 |||| || ||||| || | |||||| | | | | || | | |||| |||||| | Sbjct 5521 AAGCAGACTGGGCGTTGAGATGGATCCACGGGAAATCGACACCTTTTGCTGAACGCCTTG 5580 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 | || || | | ||||| ||| | |||||||| || || || || || ||||||| Sbjct 5581 TTGCCTTCTCTGCCGTCGAAGGTATTTTTTTCAGCGGCAGCTTCGCGGCTATATTTTGGT 5640 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 ||||||||||||| |||||||| ||| | || |||||||| || | ||||||||||||| Sbjct 5641 TGAAGAAACGTGGTCTTATGCCGGGTTTAACGTTCAGCAACGAACTCATATCACGCGACG 5700 Query 61616 AGG 61618 ||| Sbjct 5701 AGG 5703 >seq4487 Length=16325 Score = 102 bits (112), Expect = 6e-17 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 || ||||| | |||| ||||| || | || | ||| ||||| || |||||||||| | Sbjct 1410 GGGCACATTAAACACCAGTCACCGTCATCTTGAATACGGCGCATGAAAAGATCAGGTACC 1351 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || | || ||||| ||| || || ||||| || || | || || ||||| | || | Sbjct 1350 CAAACAGCAACGAAGATATCACGAGCCCGTTGTTCTTCTTTTCCATGGTTTTTTCTCACG 1291 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 |||| || || || |||||| ||||||||||||||| || | ||| |||| ||| Sbjct 1290 TCGATAAAGTCGAATATGTCGTCATGCCATGGTTCCAAATAAAGGGCAAACGCGCC 1235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397459774039040