Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq706 82.4 4e-14 >seq706 Length=139654 Score = 82.4 bits (90), Expect = 4e-14 Identities = 89/117 (76%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||| |||||||| |||| | || ||| | | || |||||| || ||||| | Sbjct 102038 GAACCGGAAGACTTTCGTTTCCGATTAGCTGCTCATCAAGGCAAAAT--TACCATCGACG 101981 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| |||| |||||| ||||| ||||| | ||||||||||||| |||||| Sbjct 101980 AATCGCTAGTTGGCAGAGTTTAGGGTTAGGACTAGGGCGGTATCTGATCGCCTTCGA 101924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395923180