Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq883 89.7 9e-16 seq1509 86.0 1e-14 seq1452 86.0 1e-14 seq706 80.6 5e-13 seq325 77.0 6e-12 >seq883 Length=184153 Score = 89.7 bits (98), Expect = 9e-16 Identities = 98/129 (76%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 ||||||| |||| ||| |||||| || ||||| || |||||||| ||||| ||| Sbjct 139027 ATGATTAGTAGGAATAAACGGGGGCGTTCGTATTGTTACGTTAGAGGTGAGATTCTGGGA 139086 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| | | ||||||||||| || ||||| |||||||||||||||| ||| Sbjct 139087 CCGTAGCAAGACGATCGACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 139145 Query 306 CGAAAGTTA 314 ||||||||| Sbjct 139146 CGAAAGTTA 139154 >seq1509 Length=546771 Score = 86.0 bits (94), Expect = 1e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 || |||||||||||||| ||| ||||| | | ||||||||||| || ||||| Sbjct 5579 GTTAGAGGTGAAATTCTGGGACCGTAGCAAGACGATCGACTGCGAAAGCATTTGCCAAGA 5638 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| |||||||||||||||| Sbjct 5639 ATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 5671 >seq1452 Length=66986 Score = 86.0 bits (94), Expect = 1e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 || |||||||||||||| ||| ||||| | | ||||||||||| || ||||| Sbjct 46446 GTTAGAGGTGAAATTCTGGGACCGTAGCAAGACGATCGACTGCGAAAGCATTTGCCAAGA 46387 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| |||||||||||||||| Sbjct 46386 ATGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 46354 >seq706 Length=139654 Score = 80.6 bits (88), Expect = 5e-13 Identities = 72/89 (81%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||| ||| ||||| | | ||||||||||| || ||||| ||||| Sbjct 101835 AGGTGAAATTCTGGGACCGTAGCAAGACGATCGACTGCGAAAGCATTTGCCAAGAATGTT 101894 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||| |||||||||||||||| Sbjct 101895 TTCATTAATCA-AGAACGAAAGTTAGGGG 101922 >seq325 Length=30843 Score = 77.0 bits (84), Expect = 6e-12 Identities = 74/94 (79%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 || |||||||||||||| ||| || ||| | | ||||||||||| || ||||| Sbjct 10855 GTTAGAGGTGAAATTCTGGGACCATAGGATGACGATCGACTGCGAAAGCATTTGCCAAGA 10796 Query 285 ATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||| ||||||| ||||| || Sbjct 10795 ATGTTTTCATTAATCA-AGAACGAAGGTTAGAGG 10763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185704576