Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq927 120 1e-24 seq1314 107 8e-21 seq1150 86.0 3e-14 >seq927 Length=64470 Score = 120 bits (132), Expect = 1e-24 Identities = 93/110 (85%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| ||| | | |||||||||||||||||||||||||||| ||| ||||||| || Sbjct 48836 AGAGCGTAGGTTGCGCGACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCGGA 48777 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||| |||||||| | | |||||||||||||||||||||||||||| Sbjct 48776 GGAAA--CTGGTGGAAGTGCAAAGCGGTTCTGGCGTGCAAATCGATCGTC 48729 >seq1314 Length=371374 Score = 107 bits (118), Expect = 8e-21 Identities = 82/97 (85%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 || ||||||||| |||||||||||||||| | ||| ||||||| |||||||||||||| Sbjct 215019 TGCGACCCGAAAAATGGTGAACTATGCCTCAGCAGGATGAAGCCGTAGGAAACTCTGGTG 214960 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 | | || |||||||| | ||||||||||||||||| Sbjct 214959 GCAGTCCGAAGCGGTTCCGACGTGCAAATCGATCGTC 214923 >seq1150 Length=1226963 Score = 86.0 bits (94), Expect = 3e-14 Identities = 108/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100 ||| | ||||||| ||| ||||| | || | || || | ||| |||||||||||||| Sbjct 587829 AGTAGGGTTGTTTTGGATCGCAGCACAAAGTAGGTTGTGTAATTCATCTAAAGCTAAATA 587888 Query 101 TTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG--G 157 | | | || |||||||| ||||||| ||| ||||| || ||||||||||| | Sbjct 587889 C-GACTACGAATCCGATAGCAAACAAGTACCATGAGAGAAAGTTGCAAAGCACTTTGAAG 587947 Query 158 AAAGAGAGTTAAAAAGCACGTGAAA 182 | |||||||| || || |||||||| Sbjct 587948 AGAGAGAGTTCAAGAGGACGTGAAA 587972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079966495100