Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1343 104 2e-20 >seq1343 Length=5826 Score = 104 bits (114), Expect = 2e-20 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 33 CGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCA 92 || |||| ||| ||| | | | |||||| | ||||||||||| |||||||||| Sbjct 3990 CGCAAGCAGATGAGGGTGGCACAGACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGG 4049 Query 93 CTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| || || ||| |||||||||||| ||||||||||||||||| |||||||||| Sbjct 4050 CTCTGCGAAGTCGCAAGACGACGTATAGGGTCTGACGCCTGCCCGGTGCTGGAAGGTTAA 4109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476792785122