Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1343 333 7e-89 >seq1343 Length=5826 Score = 333 bits (368), Expect = 7e-89 Identities = 323/410 (79%), Gaps = 29/410 (7%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | || |||||||||||||||||| | ||||||||||| | ||||| Sbjct 4282 GCATCTTCACGGGGAATTCAATTTCACTGAGTCTGCGTTGGAGACAGCGGGGAAGTCGTT 4223 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4222 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4163 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTTAGCTAACCCCAT 191 | |||||||||||||||||| |||||||| | ||||| |||| || ||| | Sbjct 4162 TAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAG-GCTT-GC--------ACCTCTC 4113 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 | |||||||||| ||||||||||||||||| |||||||||||| ||| || || ||| Sbjct 4112 CTCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTTCGCA 4053 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTT 311 ||| |||||||||| ||||||||||| | |||||| | | | ||| ||| |||| Sbjct 4052 GAGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTCTGTGCCACCCTCATCTGCTT 3993 Query 312 ACG-GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG-GTGCCTTTT 369 || | |||| |||| ||||| ||||||||||| ||| | || Sbjct 3992 GCGCAAACAAG--GGTCAC-------------GCTTCTTCCGAAGTTACGCGTG-CAATT 3949 Query 370 TGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 |||| ||||||||| | ||||||||||||||||||||||| ||||||| Sbjct 3948 TGCCGAGTTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATACTCTACC 3899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260780306304