Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1343 318 1e-84 >seq1343 Length=5826 Score = 318 bits (352), Expect = 1e-84 Identities = 296/375 (79%), Gaps = 22/375 (6%) Strand=Plus/Minus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| |||||| | ||||||| | || Sbjct 4287 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCTGCGTTGGAGACAGCGGGGAAG 4228 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 4227 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 4168 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||||||||||||||||||||||||||||||| | |||| || |||| || Sbjct 4167 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAGGC-----TTGC----ACC 4117 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 4116 TCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTT 4057 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT- 300 ||||| ||||||||||||||||||||||||| ||| ||| ||| || |||| Sbjct 4056 CGCAGAGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTCTGTGCCACC-CTCATC 3998 Query 301 ---------AGACA--GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 | ||| || | ||||| || |||||||| | || ||||||||||||| Sbjct 3997 TGCTTGCGCAAACAAGGGTCACGCTTCTTCCGAAGTTACGCGTGCAATTTGCCGAGTTCC 3938 Query 350 TTAACAATAGTTCTC 364 || | ||||||| Sbjct 3937 TTCAACGCAGTTCTC 3923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062383405312