Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1343 508 2e-141 >seq1343 Length=5826 Score = 508 bits (562), Expect = 2e-141 Identities = 418/501 (83%), Gaps = 11/501 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 983 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1042 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT-CCTCTGACCCCT 119 ||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||| | Sbjct 1043 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCTCTTGACATGCCTATGAATGTT 1102 Query 120 C-TAGAGATAGAGGTTTC--CCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCG 176 | |||| | |||| || ||||||| || | ||||||| ||||||| ||||| Sbjct 1103 AGTGGAGACAC---TTTCAGCCTTTCGGGGCGTAG-GACACAGGTGCTGCATGGCTGTCG 1158 Query 177 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAG 236 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1159 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCTTTAG 1218 Query 237 TTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 ||||||||||| ||||||||||||||| ||||||| |||| || | |||||||||||| Sbjct 1219 TTGCCATCATTTAGTTGGGCACTCTAAAGGGACTGCCAGTGATAAGCTGGAGGAAGGTGG 1278 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| || ||||| |||||| | |||||||||||||||||||||||| Sbjct 1279 GGATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAATGGTGG 1338 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATC-CCATAAAGTTGTTCTCAGTTCG 415 ||| ||||||||| | ||||||||| ||| |||| ||| ||| |||||||||| Sbjct 1339 TGACAGTGGGCAGCGAGATCGCGAGGTCGAGCTAATCTCCAAAAA--CCATCTCAGTTCG 1396 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475 ||||| | |||||||||||| | |||||| |||||||||||||||||| |||||| || Sbjct 1397 GATTGCACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGCGGATCAGAAT 1456 Query 476 GCTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 1457 GCCGCGGTGAATACGTTCCCG 1477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503976507520