Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1343 183 6e-44 >seq1343 Length=5826 Score = 183 bits (202), Expect = 6e-44 Identities = 228/310 (74%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 31 CGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCG 90 |||||| ||| |||| | ||| |||| |||| | | || | ||| |||||| | Sbjct 4389 CGCCAGCCTTCGTGGAGTCATCCTTGAAATACCACCCTTATCGTCATAGATGTCTAACTG 4448 Query 91 -GACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGC 149 ||| |||||| ||| | |||| |||| | ||| |||||||||||||||||||| Sbjct 4449 CGACC-CGTATATCCGGGTCCAGGACCGTGTATGGTGGGTAGTTTGACTGGGGCGGTCGC 4507 Query 150 CTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCA 209 |||| |||||||||||||||||| | | | | ||||| || ||||| | | || Sbjct 4508 CTCCTAAAGAGTAACGGAGGCGCGCGATGGTGGGCTCAGAACGGTCGGAAATCGTTCGTC 4567 Query 210 CAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGT 269 ||||||| |||| ||| | ||||||| | || |||||| ||||| ||||||||| Sbjct 4568 GAGTGCAATGGCATAAGCCCGCCTGACTGCAAGACAGACAAGTCGAGCAGAGACGAAAGT 4627 Query 270 CGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTAC 329 ||| | || |||||||| ||| | | ||||| |||| |||||| ||||||||||| ||| Sbjct 4628 CGGTCATAGTGATCCGGTGGTCCCGTGTGGAAGGGCCATCGCTCAACGGATAAAAGGTAC 4687 Query 330 CCTGGGGATA 339 | ||||||| Sbjct 4688 GCCGGGGATA 4697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982384654912