Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1343 205 2e-50 >seq1343 Length=5826 Score = 205 bits (226), Expect = 2e-50 Identities = 207/270 (77%), Gaps = 16/270 (6%) Strand=Plus/Minus Query 67 CAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGAC 126 |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | Sbjct 718 CAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGC 659 Query 127 TGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACT 186 |||||||||||||||||||| || |||||||||||||||| ||| ||||| ||||||| Sbjct 658 TGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCTTTACCCTACCAACT 599 Query 187 AGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGA-AGGTCCCCTGCTTTCTCC 245 ||||||||| || | ||||||| || |||| | | ||||| || Sbjct 598 AGCTAATCCAACATGGGCTCAT---------CATTCTCCGATAAAT------CTTTCCCC 554 Query 246 CGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGA 305 ||| ||||| |||||||||| |||||| ||||| || | || ||| Sbjct 553 AAAAGGGCGTATACGGTATTAGCACAAGTTTCCCTGAGTTATTCCGTAGAGAACGGTAGA 494 Query 306 TTCCTAGGCATTACTCACCCGTCCGCCGCT 335 |||| | |||||||||||||||| ||| || Sbjct 493 TTCCCATGCATTACTCACCCGTCTGCCACT 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071983255360