Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1343 217 3e-54 >seq1343 Length=5826 Score = 217 bits (240), Expect = 3e-54 Identities = 302/410 (74%), Gaps = 16/410 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| || |||| | |||| ||||| | Sbjct 3752 CGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGGCTAACCCTGCTCAGATTAACTTTAAG 3693 Query 61 CTGGAACCCTTGGATAATCGGCG-GACGGGAT-TCCCACCCGTCACACGCTACTCATGCC 118 | |||||||||||| |||||| || | | || ||| | | | || |||||||| | Sbjct 3692 CAGGAACCCTTGGACTTTCGGCGAGAGTGTCTCTCACACTCTTTAT-CGTTACTCATGTC 3634 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGC-TTCACCA-CTGAC 175 ||||||||||| | || | ||||| | | |||| | | ||||| || || Sbjct 3633 AGCATTCTCACTTCTGAT-ACCTCCAGGAT-CTCTCACGAGTATCCCTTCACAGGCTTAC 3576 Query 176 ACGACGCTCCCCTACCCAACCACACAGGTTG--CCACAGCTTCGGCGGATAACTTAAGCC 233 | ||||||| ||||| | |||| | || |||||||||||| | || ||| |||| Sbjct 3575 AGAACGCTCCGCTACC-ACGCACATACGTGCATCCACAGCTTCGGTGTATGGCTTTAGCC 3517 Query 234 CCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACTCTTTC 288 ||| |||||| ||||||| | | ||| |||||||||||| |||||| ||||| Sbjct 3516 CCGGTACATTTTCGGCGCAAAGACCCTTATCTAGACCAGTGAGCTGTTACGCTTTCTTTA 3457 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 || |||||||||||| |||||||| |||||||||| | | | | |||||||||||||| Sbjct 3456 AATGATGGCTGCTTCTAAGCCAACATCCTGGTTGTTTTGGGATCCTCACATCCTTTCCCA 3397 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || || || |||||||| |||||| || || || ||| |||| |||||| Sbjct 3396 CTTAGCCATAACTTAGGGACCTTAGATGGTGGTCAGGGTTGTTGCCCTCT 3347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177581605888